Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cotl1Q9CQI6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cotl1Q9CQI6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Gm6376-201ENSMUST00000209407 580 ntBASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cotl1Q9CQI6 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms