Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.44□□□□□ -0.26
Msh4Q99MT2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.44□□□□□ -0.26
Msh4Q99MT2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.44□□□□□ -0.26
Msh4Q99MT2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Gm43703-201ENSMUST00000200523 763 ntBASIC13.44□□□□□ -0.26
Msh4Q99MT2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.44□□□□□ -0.26
Msh4Q99MT2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Msh4Q99MT2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.43□□□□□ -0.26
Msh4Q99MT2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Msh4Q99MT2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm7063-201ENSMUST00000186840 981 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.42□□□□□ -0.26
Msh4Q99MT2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Msh4Q99MT2 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.41□□□□□ -0.26
Msh4Q99MT2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Msh4Q99MT2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms