Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13786-201ENSMUST00000122371 333 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm29396-201ENSMUST00000185659 716 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm45865-201ENSMUST00000211815 945 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.46□□□□□ -0.09
Clp1Q99LI9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clp1Q99LI9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clp1Q99LI9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm26083-201ENSMUST00000157904 193 ntBASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm16379-201ENSMUST00000161469 348 ntBASIC14.45□□□□□ -0.1
Clp1Q99LI9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm8762-201ENSMUST00000193486 339 ntBASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm37259-201ENSMUST00000193903 849 ntBASIC14.45□□□□□ -0.1
Clp1Q99LI9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Gm10146-201ENSMUST00000072739 309 ntBASIC14.45□□□□□ -0.1
Clp1Q99LI9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clp1Q99LI9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm12241-201ENSMUST00000118330 726 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm15808-201ENSMUST00000119046 604 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm2445-201ENSMUST00000182798 989 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm29199-201ENSMUST00000187766 775 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm16372-201ENSMUST00000073088 450 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.44□□□□□ -0.1
Clp1Q99LI9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clp1Q99LI9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms