Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vmp1Q99KU0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Gm24543-201ENSMUST00000103867 82 ntBASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Gm17837-201ENSMUST00000186435 985 ntBASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vmp1Q99KU0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Gm10275-202ENSMUST00000168697 495 ntBASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Mir7023-201ENSMUST00000185093 64 ntBASIC13.3□□□□□ -0.28
Vmp1Q99KU0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.3□□□□□ -0.28
Vmp1Q99KU0 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Gm10275-201ENSMUST00000092620 635 ntBASIC13.3□□□□□ -0.28
Vmp1Q99KU0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vmp1Q99KU0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms