Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc1bQ920F6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc1bQ920F6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smc1bQ920F6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm15460-201ENSMUST00000118147 391 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm8062-201ENSMUST00000139696 444 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Snora78-201ENSMUST00000158630 128 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm17420-201ENSMUST00000164753 153 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.91■□□□□ 0.14
Smc1bQ920F6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smc1bQ920F6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Gm45784-201ENSMUST00000188360 142 ntBASIC15.9■□□□□ 0.14
Smc1bQ920F6 Gm18307-201ENSMUST00000206864 949 ntBASIC15.9■□□□□ 0.14
Smc1bQ920F6 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.9■□□□□ 0.14
Smc1bQ920F6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.9■□□□□ 0.14
Smc1bQ920F6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smc1bQ920F6 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.89■□□□□ 0.14
Smc1bQ920F6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.89■□□□□ 0.13
Smc1bQ920F6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Smc1bQ920F6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smc1bQ920F6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smc1bQ920F6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms