Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm13689-201ENSMUST00000119360 685 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm18307-201ENSMUST00000206864 949 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdha2Q91Y17 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm12403-201ENSMUST00000121384 959 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha2Q91Y17 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gm23984-201ENSMUST00000157139 203 ntBASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha2Q91Y17 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms