Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdha3Q91Y16 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Gm16215-201ENSMUST00000161990 637 ntBASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Gm10766-202ENSMUST00000194123 606 ntBASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdha3Q91Y16 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Gm15321-201ENSMUST00000121290 288 ntBASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdha3Q91Y16 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Gm9522-201ENSMUST00000182394 926 ntBASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdha3Q91Y16 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms