Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm5354-201ENSMUST00000182417 973 ntBASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm2423-201ENSMUST00000074863 733 ntBASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdha9Q91Y11 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm15770-201ENSMUST00000117498 584 ntBASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm5866-201ENSMUST00000177881 973 ntBASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdha9Q91Y11 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm43094-201ENSMUST00000196549 921 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Gm19220-201ENSMUST00000222682 803 ntBASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdha9Q91Y11 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdha9Q91Y11 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms