Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhac1Q91Y10 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.92□□□□□ -0.34
Pcdhac1Q91Y10 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhac1Q91Y10 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhac1Q91Y10 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Mir449b-201ENSMUST00000104833 80 ntBASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhac1Q91Y10 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gm7774-201ENSMUST00000200064 533 ntBASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhac1Q91Y10 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhac1Q91Y10 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhac1Q91Y10 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhac1Q91Y10 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms