Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 AC116797.2-202ENSMUST00000223587 1017 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhb20Q91XZ9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm7063-201ENSMUST00000186840 981 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm19214-201ENSMUST00000191956 1083 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm38117-201ENSMUST00000194653 939 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm43703-201ENSMUST00000200523 763 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 AL589696.1-201ENSMUST00000225711 330 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb20Q91XZ9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm15741-201ENSMUST00000119401 754 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm11834-201ENSMUST00000122257 585 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb20Q91XZ9 Gm42964-201ENSMUST00000202965 382 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms