Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb5Q91XZ5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb5Q91XZ5 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Gm27331-201ENSMUST00000183705 60 ntBASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Gm26315-201ENSMUST00000083890 321 ntBASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb5Q91XZ5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm5187-201ENSMUST00000117317 991 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm5370-201ENSMUST00000187187 574 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm29705-201ENSMUST00000212598 474 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb5Q91XZ5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm12403-201ENSMUST00000121384 959 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb5Q91XZ5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms