Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm9522-201ENSMUST00000182394 926 ntBASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Mir8102-201ENSMUST00000184148 139 ntBASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Gm29667-201ENSMUST00000190817 490 ntBASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdhb6Q91XZ4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gm27838-201ENSMUST00000184829 128 ntBASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pcdhb6Q91XZ4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Gm14719-201ENSMUST00000121891 340 ntBASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Mir7023-201ENSMUST00000185093 64 ntBASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.12□□□□□ -0.15
Pcdhb6Q91XZ4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdhb6Q91XZ4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms