Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga3Q91XY5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm8410-201ENSMUST00000117225 605 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 AA543401-201ENSMUST00000164248 1269 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Mir125a-201ENSMUST00000083545 68 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga3Q91XY5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga3Q91XY5 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms