Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TraipQ8VIG6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TraipQ8VIG6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm8213-201ENSMUST00000118191 441 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm6152-201ENSMUST00000151704 340 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Mir1982-201ENSMUST00000157368 74 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm29127-201ENSMUST00000188304 517 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Gm38671-201ENSMUST00000200573 130 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.63□□□□□ -0.07
TraipQ8VIG6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TraipQ8VIG6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm12403-201ENSMUST00000121384 959 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm29649-201ENSMUST00000185649 419 ntBASIC14.62□□□□□ -0.07
TraipQ8VIG6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TraipQ8VIG6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms