Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Gm2651-201ENSMUST00000203560 838 ntBASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpa1Q8VEE4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Mir5126-201ENSMUST00000175513 77 ntBASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Gm27301-201ENSMUST00000184012 127 ntBASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Thap2-203ENSMUST00000218989 527 ntBASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rpa1Q8VEE4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Gm2445-201ENSMUST00000182798 989 ntBASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Rpa1Q8VEE4 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rpa1Q8VEE4 Gm9385-201ENSMUST00000117563 472 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms