Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx39aQ8VDW0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx39aQ8VDW0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx39aQ8VDW0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ddx39aQ8VDW0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Gm12390-201ENSMUST00000117897 397 ntBASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx39aQ8VDW0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gm38223-201ENSMUST00000194484 695 ntBASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gm7287-201ENSMUST00000205267 602 ntBASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ddx39aQ8VDW0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Gm15371-201ENSMUST00000117057 784 ntBASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Gm8652-201ENSMUST00000181363 964 ntBASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx39aQ8VDW0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ddx39aQ8VDW0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms