Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rprd1aQ8VDS4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rprd1aQ8VDS4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Mir698-201ENSMUST00000102164 109 ntBASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Gm24420-201ENSMUST00000176676 59 ntBASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rprd1aQ8VDS4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rprd1aQ8VDS4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms