Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm33320-201ENSMUST00000192232 530 ntBASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Gm45668-201ENSMUST00000211271 493 ntBASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ushbp1Q8R370 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.44■□□□□ 0.06
Ushbp1Q8R370 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ushbp1Q8R370 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Mir7085-201ENSMUST00000184353 66 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm37917-201ENSMUST00000194711 392 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Gm15823-201ENSMUST00000064305 670 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ushbp1Q8R370 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm15460-201ENSMUST00000118147 391 ntBASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm13829-201ENSMUST00000119600 138 ntBASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ushbp1Q8R370 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms