Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
H2afjQ8R1M2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
H2afjQ8R1M2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gm2213-201ENSMUST00000197485 688 ntBASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gm18049-201ENSMUST00000208909 581 ntBASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.79□□□□□ -0.36
H2afjQ8R1M2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afjQ8R1M2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
H2afjQ8R1M2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
H2afjQ8R1M2 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms