Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf39Q8K2Z2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Gm21854-201ENSMUST00000179901 471 ntBASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Gm10576-201ENSMUST00000191927 825 ntBASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Gm17795-201ENSMUST00000214505 757 ntBASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Syt7-204ENSMUST00000223586 1344 ntBASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf39Q8K2Z2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Gm15321-201ENSMUST00000121290 288 ntBASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf39Q8K2Z2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms