Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cchcr1Q8K2I2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gm27533-201ENSMUST00000183800 152 ntBASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gm8396-201ENSMUST00000057361 823 ntBASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cchcr1Q8K2I2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gm4804-201ENSMUST00000182234 999 ntBASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cchcr1Q8K2I2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Gm5425-201ENSMUST00000214125 459 ntBASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cchcr1Q8K2I2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cchcr1Q8K2I2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms