Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm8927-201ENSMUST00000181978 981 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm18905-201ENSMUST00000205454 928 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CroccQ8CJ40 Gm3222-201ENSMUST00000071282 990 ntBASIC13.17□□□□□ -0.3
CroccQ8CJ40 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Auts2-212ENSMUST00000178555 309 ntBASIC13.16□□□□□ -0.3
CroccQ8CJ40 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.16□□□□□ -0.3
CroccQ8CJ40 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CroccQ8CJ40 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gm12485-201ENSMUST00000119641 291 ntBASIC13.15□□□□□ -0.3
CroccQ8CJ40 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.15□□□□□ -0.3
CroccQ8CJ40 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.15□□□□□ -0.3
CroccQ8CJ40 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms