Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm14042-201ENSMUST00000120139 833 ntBASIC14.08□□□□□ -0.16
CopaQ8CIE6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 AA619741-201ENSMUST00000195095 646 ntBASIC14.08□□□□□ -0.16
CopaQ8CIE6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm20445-201ENSMUST00000061905 565 ntBASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 BC001981-202ENSMUST00000191393 1545 ntBASIC14.08□□□□□ -0.16
CopaQ8CIE6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.08□□□□□ -0.16
CopaQ8CIE6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CopaQ8CIE6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm12859-201ENSMUST00000117834 427 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm10275-202ENSMUST00000168697 495 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm10275-201ENSMUST00000092620 635 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.07□□□□□ -0.16
CopaQ8CIE6 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CopaQ8CIE6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm22189-201ENSMUST00000103822 86 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.06□□□□□ -0.16
CopaQ8CIE6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CopaQ8CIE6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms