Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Gm24196-201ENSMUST00000179161 110 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Gm7561-201ENSMUST00000211203 886 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Itm2b-204ENSMUST00000228637 783 ntBASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rab11fip3Q8CHD8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rab11fip3Q8CHD8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Gm29649-201ENSMUST00000185649 419 ntBASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Gm43438-201ENSMUST00000198133 379 ntBASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rab11fip3Q8CHD8 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Mir7085-201ENSMUST00000184353 66 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Ksr1-207ENSMUST00000226282 5260 ntBASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rab11fip3Q8CHD8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm12403-201ENSMUST00000121384 959 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.74■□□□□ 0.43
Rab11fip3Q8CHD8 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms