Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.3□□□□□ -0.44
ShfQ8CG80 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.3□□□□□ -0.44
ShfQ8CG80 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ShfQ8CG80 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
ShfQ8CG80 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Gm33320-201ENSMUST00000192232 530 ntBASIC12.29□□□□□ -0.44
ShfQ8CG80 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ShfQ8CG80 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ShfQ8CG80 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ShfQ8CG80 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.28□□□□□ -0.44
ShfQ8CG80 Gm8000-201ENSMUST00000188378 592 ntBASIC12.28□□□□□ -0.44
ShfQ8CG80 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ShfQ8CG80 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ShfQ8CG80 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ShfQ8CG80 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ShfQ8CG80 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
ShfQ8CG80 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ShfQ8CG80 Gm24543-201ENSMUST00000103867 82 ntBASIC12.27□□□□□ -0.45
ShfQ8CG80 Gm15653-201ENSMUST00000119247 907 ntBASIC12.27□□□□□ -0.45
ShfQ8CG80 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ShfQ8CG80 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.27□□□□□ -0.45
ShfQ8CG80 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.27□□□□□ -0.45
ShfQ8CG80 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms