Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ccdc28bQ8CEG5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Gm15957-201ENSMUST00000118893 974 ntBASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Mir8098-201ENSMUST00000184011 137 ntBASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Syt7-205ENSMUST00000224135 1557 ntBASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccdc28bQ8CEG5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.6□□□□□ -0.23
Ccdc28bQ8CEG5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms