Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Nup88Q8CEC0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Nup88Q8CEC0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nup88Q8CEC0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup88Q8CEC0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nup88Q8CEC0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nup88Q8CEC0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nup88Q8CEC0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm4875-201ENSMUST00000118257 786 ntBASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Gm45453-201ENSMUST00000211758 853 ntBASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Nup88Q8CEC0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Nup88Q8CEC0 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms