Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gm7862-201ENSMUST00000121461 292 ntBASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gm18195-201ENSMUST00000207604 706 ntBASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc49a3Q8CE47 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gm27920-201ENSMUST00000183953 96 ntBASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Thap2-203ENSMUST00000218989 527 ntBASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.62□□□□□ -0.39
Slc49a3Q8CE47 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Gm5177-201ENSMUST00000183092 997 ntBASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Gm27628-201ENSMUST00000184911 107 ntBASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Slc49a3Q8CE47 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms