Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc17Q8CE13 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Gm45784-201ENSMUST00000188360 142 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Gm43094-201ENSMUST00000196549 921 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc17Q8CE13 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc17Q8CE13 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm12928-201ENSMUST00000117115 573 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm27847-201ENSMUST00000183711 107 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm27375-201ENSMUST00000183799 107 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm27731-201ENSMUST00000185192 107 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm37714-201ENSMUST00000194742 342 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc17Q8CE13 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc17Q8CE13 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms