Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a6Q8C6K9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm13297-201ENSMUST00000120205 934 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm29199-201ENSMUST00000187766 775 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a6Q8C6K9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a6Q8C6K9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a6Q8C6K9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a6Q8C6K9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a6Q8C6K9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Gm11793-201ENSMUST00000120433 981 ntBASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Gm14350-201ENSMUST00000116642 640 ntBASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Gm6621-201ENSMUST00000193251 772 ntBASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a6Q8C6K9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms