Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Acot6-202ENSMUST00000222921 3622 ntBASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc60Q8C4J0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Gm7488-201ENSMUST00000117148 684 ntBASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Gm5279-201ENSMUST00000199575 745 ntBASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc60Q8C4J0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.55■□□□□ 0.4
Ccdc60Q8C4J0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc60Q8C4J0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.53■□□□□ 0.4
Ccdc60Q8C4J0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms