Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Mir3113-201ENSMUST00000175478 76 ntBASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Gm9726-201ENSMUST00000180321 678 ntBASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Tsen54Q8C2A2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tsen54Q8C2A2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tsen54Q8C2A2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Gm13597-201ENSMUST00000121239 375 ntBASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tsen54Q8C2A2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms