Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm24420-201ENSMUST00000176676 59 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm27989-201ENSMUST00000184721 107 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Gm44872-201ENSMUST00000207864 420 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trub1Q8C0D0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trub1Q8C0D0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trub1Q8C0D0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trub1Q8C0D0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm15920-201ENSMUST00000118998 402 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm12151-201ENSMUST00000121374 290 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trub1Q8C0D0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms