Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm43433-201ENSMUST00000196573 481 ntBASIC19.33■□□□□ 0.69
Usp47Q8BY87 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp47Q8BY87 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp47Q8BY87 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp47Q8BY87 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.32■□□□□ 0.68
Usp47Q8BY87 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Gm5639-201ENSMUST00000122305 2403 ntBASIC19.32■□□□□ 0.68
Usp47Q8BY87 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19.32■□□□□ 0.68
Usp47Q8BY87 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp47Q8BY87 Gm10012-201ENSMUST00000078252 192 ntBASIC19.32■□□□□ 0.68
Usp47Q8BY87 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Gm7899-201ENSMUST00000192935 1897 ntBASIC19.31■□□□□ 0.68
Usp47Q8BY87 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Gm12390-201ENSMUST00000117897 397 ntBASIC19.31■□□□□ 0.68
Usp47Q8BY87 Gm11814-201ENSMUST00000119515 929 ntBASIC19.31■□□□□ 0.68
Usp47Q8BY87 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC19.31■□□□□ 0.68
Usp47Q8BY87 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp47Q8BY87 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gm13050-201ENSMUST00000122149 1345 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gm13829-201ENSMUST00000119600 138 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gm38671-201ENSMUST00000200573 130 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gm6266-201ENSMUST00000203844 806 ntBASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp47Q8BY87 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Usp47Q8BY87 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms