Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm29667-201ENSMUST00000190817 490 ntBASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Usp43Q8BUM9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Gm14719-201ENSMUST00000121891 340 ntBASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.94□□□□□ -0.18
Usp43Q8BUM9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Usp43Q8BUM9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.93□□□□□ -0.18
Usp43Q8BUM9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms