Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap1Q8BTW8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk5rap1Q8BTW8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk5rap1Q8BTW8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk5rap1Q8BTW8 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk5rap1Q8BTW8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cdk5rap1Q8BTW8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm43433-201ENSMUST00000196573 481 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdk5rap1Q8BTW8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cdk5rap1Q8BTW8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cdk5rap1Q8BTW8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms