Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scfd1Q8BRF7 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm13226-201ENSMUST00000117838 404 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm29127-201ENSMUST00000188304 517 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Itm2b-204ENSMUST00000228637 783 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scfd1Q8BRF7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm8598-201ENSMUST00000221184 836 ntBASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm26315-201ENSMUST00000083890 321 ntBASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scfd1Q8BRF7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Gm11803-201ENSMUST00000119966 444 ntBASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scfd1Q8BRF7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms