Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Rd3Q8BRE0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rd3Q8BRE0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rd3Q8BRE0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Rd3Q8BRE0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
Rd3Q8BRE0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Gm44397-201ENSMUST00000195950 113 ntBASIC14.58□□□□□ -0.08
Rd3Q8BRE0 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rd3Q8BRE0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.58□□□□□ -0.08
Rd3Q8BRE0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Gm17420-201ENSMUST00000164753 153 ntBASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rd3Q8BRE0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Gm14660-201ENSMUST00000119809 575 ntBASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rd3Q8BRE0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms