Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.35□□□□□ -0.59
Smco3Q8BQM7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Gm43347-201ENSMUST00000200226 580 ntBASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Gm6376-201ENSMUST00000209407 580 ntBASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Smco3Q8BQM7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Smco3Q8BQM7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Smco3Q8BQM7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smco3Q8BQM7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms