Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chmp2bQ8BJF9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Chmp2bQ8BJF9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Gm45453-201ENSMUST00000211758 853 ntBASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chmp2bQ8BJF9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Gm18889-201ENSMUST00000174284 929 ntBASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Gm27631-201ENSMUST00000184163 466 ntBASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chmp2bQ8BJF9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms