Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm15920-201ENSMUST00000118998 402 ntBASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gm14767-201ENSMUST00000121559 586 ntBASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn3Q8BHH8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gm44872-201ENSMUST00000207864 420 ntBASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn3Q8BHH8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Gm27680-201ENSMUST00000184192 160 ntBASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Gm9229-201ENSMUST00000222777 126 ntBASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn3Q8BHH8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms