Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.16□□□□□ -0.3
Vrk1Q80X41 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Vrk1Q80X41 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Gm6007-201ENSMUST00000208170 823 ntBASIC13.15□□□□□ -0.3
Vrk1Q80X41 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Vrk1Q80X41 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vrk1Q80X41 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Vrk1Q80X41 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm12485-201ENSMUST00000119641 291 ntBASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Mir497b-201ENSMUST00000093601 125 ntBASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.14□□□□□ -0.31
Vrk1Q80X41 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.14□□□□□ -0.31
Vrk1Q80X41 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vrk1Q80X41 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Vrk1Q80X41 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.13□□□□□ -0.31
Vrk1Q80X41 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vrk1Q80X41 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms