Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim36Q80WG7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim36Q80WG7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gm9824-201ENSMUST00000178707 561 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.31□□□□□ -0.28
Trim36Q80WG7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim36Q80WG7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.3□□□□□ -0.28
Trim36Q80WG7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.3□□□□□ -0.28
Trim36Q80WG7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gm29541-201ENSMUST00000191351 678 ntBASIC13.3□□□□□ -0.28
Trim36Q80WG7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Trim36Q80WG7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.3□□□□□ -0.28
Trim36Q80WG7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim36Q80WG7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim36Q80WG7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms