Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdh19Q80TF3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gm5356-201ENSMUST00000093326 615 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdh19Q80TF3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Gm15371-201ENSMUST00000117057 784 ntBASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdh19Q80TF3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdh19Q80TF3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms