Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Prpf38bQ80SY5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm12585-201ENSMUST00000117307 290 ntBASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm8749-201ENSMUST00000117737 331 ntBASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm27731-201ENSMUST00000185192 107 ntBASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm7399-201ENSMUST00000032395 858 ntBASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Prpf38bQ80SY5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gm45453-201ENSMUST00000211758 853 ntBASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Prpf38bQ80SY5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gm11814-201ENSMUST00000119515 929 ntBASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Prpf38bQ80SY5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms