Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pif1Q80SX8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm11524-201ENSMUST00000119349 807 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm15429-201ENSMUST00000151268 798 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm19078-201ENSMUST00000206311 727 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.74□□□□□ -0.37
Pif1Q80SX8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pif1Q80SX8 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Gm13385-201ENSMUST00000121089 220 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Mir6420-201ENSMUST00000185032 102 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pif1Q80SX8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.73□□□□□ -0.37
Pif1Q80SX8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.73□□□□□ -0.37
Pif1Q80SX8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm8927-201ENSMUST00000181978 981 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Gm2495-201ENSMUST00000191160 466 ntBASIC12.72□□□□□ -0.37
Pif1Q80SX8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms