Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rif1Q6PR54 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rif1Q6PR54 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.58□□□□□ -0.56
Rif1Q6PR54 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm9211-201ENSMUST00000182882 975 ntBASIC11.58□□□□□ -0.56
Rif1Q6PR54 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.58□□□□□ -0.56
Rif1Q6PR54 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm38317-201ENSMUST00000195564 343 ntBASIC11.58□□□□□ -0.56
Rif1Q6PR54 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rif1Q6PR54 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.58□□□□□ -0.56
Rif1Q6PR54 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm12795-201ENSMUST00000117594 539 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Rmrp-201ENSMUST00000157463 271 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm10179-201ENSMUST00000086233 688 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm8325-201ENSMUST00000099086 453 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm13665-201ENSMUST00000120830 528 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm27772-201ENSMUST00000184900 187 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm8885-201ENSMUST00000189382 598 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Gm8768-201ENSMUST00000220020 826 ntBASIC11.57□□□□□ -0.56
Rif1Q6PR54 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rif1Q6PR54 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rif1Q6PR54 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms