Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Gm6222-201ENSMUST00000120787 396 ntBASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Scaf4Q6PFF0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scaf4Q6PFF0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Scaf4Q6PFF0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scaf4Q6PFF0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Gm11025-201ENSMUST00000140773 466 ntBASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Gm9727-201ENSMUST00000161387 555 ntBASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scaf4Q6PFF0 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Gm6443-201ENSMUST00000203599 874 ntBASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Gm18057-201ENSMUST00000208220 503 ntBASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Scaf4Q6PFF0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms