Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Cts7-204ENSMUST00000225321 1257 ntBASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chd4Q6PDQ2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Gm44364-201ENSMUST00000198368 141 ntBASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chd4Q6PDQ2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chd4Q6PDQ2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Gm8805-201ENSMUST00000117848 313 ntBASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chd4Q6PDQ2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chd4Q6PDQ2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chd4Q6PDQ2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms