Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcc2Q6PDG5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Syt7-205ENSMUST00000224135 1557 ntBASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcc2Q6PDG5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm12585-201ENSMUST00000117307 290 ntBASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm15321-201ENSMUST00000121290 288 ntBASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm9522-201ENSMUST00000182394 926 ntBASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smarcc2Q6PDG5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Mir698-201ENSMUST00000102164 109 ntBASIC16.04■□□□□ 0.16
Smarcc2Q6PDG5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms